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Table 1 Minimum and maximum values for the image analysis parameters calculated by PHLIP during the development of phototrophic marine biofilms. ANOVA testing determined whether variations in biofilm parameters over time was statistically significant. Significance levels are indicated by asterisks. Channels; concanavaline A (ConA), syto64 (syto), chlorophylla (chla).

From: Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP

 

Single channel

Two channels

All channels

 

ConA

syto

Chla

ConA-syto

ConA-chla

syto-chla

  

Biovolumea

5.8–28.8

n.s.

0.5–4.7

***

0.1–61.9

***

      

8.4–82.3

***

Substratum coverage

0.48–0.86

n.s.

0.07–1.63

***

0.03–2.86

***

        

Area-to-volume ratio

3.5–5.8

n.s.

3.2–5.0

**

1.4–4.4

**

        

Horizontal spreadinga

8.4–9.1

n.s.

5.8–8.3

**

1.9–7.7

***

        

Vertical spreadinga

0.09–27.5

***

0.03–24.0

**

0.02–30.4

***

        

Total spreadinga

8.5–11.7

n.s.

8.3–9.3

*

2.0–10.8

***

        

Average thickness

15.3–127.4

***

6.3–111.2

*

4.3–102.3

***

      

6.3–111.2

**

Biofilm roughness

0.15–0.26

n.s.

0.04–0.20

***

0.02–0.30

***

      

0.24–0.35

n.s.

Co-localization in 2D

      

5.4–14.5

n.s.

0–3.7

n.s.

0.5–27.9

n.s.

  

Co-localization in 3D

      

0.9–5.2

n.s.

0–0.8

n.s.

0.04–2.7

n.s.

  
  1. a: × 103; ***; p < 0.001; **: p < 0.01; *: p < 0.05; n.s. not significant