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Table 1 ITS1/ITS2 translation table

From: SymbioGBR: a web-based database of Symbiodinium associated with cnidarian hosts on the Great Barrier Reef

ITS1 type

Genbank #

ITS2 type

Genbank #

Comments

C1_sensu van Oppen

FJ529563

C1

AF333515

 

C1:1a

 

C1

AF333515

equals ITS1 C1a and ITS2 C1

C1:2

AF380552

C1

AF333515

equals ITS1 C2 and ITS2 C1

C1:3a

AY758440

C1

AF333515

equals ITS1 C3a and ITS2 C1

C1n

 

C8a

FJ529613

 

C2

AF380552

C3

AF499789

sensu van Oppen

C3

AF380533

C3

AF499789

sensu van Oppen

C3a

AY758440

C1

AF333515

 

C3t

FJ529569

C3t

FJ529595

 

C33

FJ529566

C33

AY258498

 

C33a

FJ529564

C33a

EF541147

 

C42a

FJ529561

C42a

FJ529656

 

C78a

FJ529562

C78a

FJ529605

 

C79

FJ529560

C79

FJ529570

 

Cdot

AF180127

C15

AY239369

 

Cdot

AF180127

C17

AY239369

 

Cn

AY758555

  

no ITS2 match sensu van Oppen

  1. Example of the cross-referencing functionality of the website, showing an overview of Symbiodinium types that have been identified by both ITS1 and ITS2. Genbank accession numbers are provided when available. Symbiodinium types that differ in their ITS1 versus ITS2 nomenclature are indicated in italics. Nomenclature is sensu LaJeunesse unless stated otherwise.