Table 1 Taxonomic classification of the 76 species from marine eight metazoan phyla (plus one alga species) sequenced with the primers LoboF1 and LoboR1
From: Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans
Species analyzed in this project | Species from the BLAST search | |||||
|---|---|---|---|---|---|---|
Kingdom | Phylum | Class | Order | Genus/Species | Specimen / similarity (%) | GenBank Accession |
Animalia | Annelida | Polychaeta | Axiothella constricta | Nicolea zostericola / 80 | HQ024409 | |
Euclymene sp. | Maldanidae sp. / 81 | HQ023886 | ||||
Euclymene robusta | Hyalinoecia sp. / 79 | GQ497524 | ||||
Euclymene santandarensis | Axiothella rubrocincta / 82 | HM473326 | ||||
Leiochone leiopygos | Axiothella rubrocincta /83 | HM473326 | ||||
Praxillella praetermissa | Axiothella rubrocincta / 80 | HM473326 | ||||
Unidentified Orbiniidae | Naineris laevigata / 77 | GU362690 | ||||
Sabellida | Sabella pavonina | Branchiomma sp. / 87* | ACF75771 | |||
Spionida | Scolelepis (Scolelepis) foliosa | Spionidae sp. / 81 | GU672502 | |||
Phyllodocida | Glycera alba | Glycera sp. / 78 | HM473389 | |||
Hediste diversicolor | Hediste diversicolor / 98 | FJ030974 | ||||
Arthropoda | Malacostraca | Decapoda | Deosergestes corniculum | Eusergestes similis / 85 | DQ882149 | |
Porcellana platycheles | Anomura sp. / 87 | HM464308 | ||||
Pestarella tyrrhena | Anomura sp. / 84 | HM465098 | ||||
Calappa granulata | Calappa granulata / 99 | JQ306054 | ||||
Calappa pelii | Calappa granulata / 99 | JQ306054 | ||||
Atelecyclus sp. | Cancer bellianus / 86 | JQ306131 | ||||
Macropodia sp. | Macropodia rostrata / 99 | JQ306016 | ||||
Pilumnus hirtellus | Pilumnus hirtellus / 94 | JQ306038 | ||||
Carcinus maenas | Carcinus maenas / 99 | FJ581593 | ||||
Lophozozymus incisus | Hermodice carunculata / 98 | AY495947 | ||||
Pinnotheres pisum | Neosarmatium fourmanoiri / 85 | FN392165 | ||||
Eualus cranchii | Anomura sp. / 85 | HM464348 | ||||
Oplophorus spinosus | Oplophorus spinosus / 100 | JQ306166 | ||||
Systellaspis debilis | Systellaspis debilis / 99 | JQ306181 | ||||
Systellaspis pellucida | Systellaspis pellucida / 99 | JQ306183 | ||||
Palaemon elegans | Palaemon elegans / 99 | JQ306030 | ||||
Chlorotocus crassicornis | Chlorotocus crassicornis / 100 | JQ305891 | ||||
Pandalina brevirostris | Eumunida capillata / 82 | EU243342 | ||||
Plesionika acanthonotus | Plesionika acanthonotus / 99 | JQ306170 | ||||
Plesionika heterocarpus | Plesionika heterocarpus / 99 | JQ306279 | ||||
Stylopandalus richardi | Plesionika narval / 99 | JQ305932 | ||||
Unidentified Paguridae | Emerita analoga / 83 | AF425302 | ||||
Amphipoda | Ampithoe sp. | Stenothoidae sp / 86 | EF989710 | |||
Caprella andreae | Amphipoda sp. / 82 | GQ260853 | ||||
Corophium sp. | Cerodontha incisa / 80 | EF104689 | ||||
Elasmopus rapax | Amphipoda sp. / 82 | HM466480 | ||||
Jassa sp.1 | Jassa staudei / 82 | EU243782 | ||||
Jassa sp.2 | Jassa marmorata / 83 | EU243747 | ||||
Maera inaequipes | Amphipoda sp. / 82 | HM465802 | ||||
Melita palmata | Melita plumulosa / 79 | JN790072 | ||||
Microdeutopus chelifer | Amphipoda sp. / 83 | HM466455 | ||||
Isopoda | Idotea granulosa | Idotea baltica / 90 | FJ581714 | |||
Idotea pelagica | Idotea pelagica / 98 | JQ425512 | ||||
Talitrus saltator | Pseudorquestoidea brito / 91 | JX094870 | ||||
Chordata | Ascidiacea | Stolidobranchia | Microcosmus squamiger | Microcosmus squamiger / 100 | FJ528602 | |
Styela clava | Styela clava / 99 | FJ528636 | ||||
Actinopterygii | Gobiesociformes | Lepadogaster lepadogaster | Dormitator maculatus / 82 | AY722137 | ||
Perciformes | Pomatoschistus lozanoi | Pomatoschistus tortonesei / 90 | FJ751922 | |||
Bassγ | Dicentrarchus labrax / 100 | FN689114 | ||||
Tunaγ | Thunnus albacares / 99 | GU451782 | ||||
Pleuronectiformes | Solea senegalensis | Solea senegalensis / 99 | EU513739 | |||
Cnidaria | Anthozoa | Pennatulacea | Veretillum cynomorium | Funiculina sp. / 96 | JN227949 | |
Echinodermata | Asteroidea | Forcipulatida | Marthasterias glacialis | Marthasterias glacialis / 99 | DQ077925 | |
Ophiuroidea | Ophiurida | Ophiothrix fragilis | Ophiothrix fragilis / 98 | EU583122 | ||
Echinoidea | Camarodonta | Paracentrotus lividus | Paracentrotus lividus / 99 | EF462949 | ||
Mollusca | Bivalvia | Nuculida | Nucula sulcata | Nucula sulcata / 100 | DQ280017 | |
Arcoida | Anadara sp. | Anadara diluvii / 99 | JF496763 | |||
Mytiloida | Mytilus edulis | Mytilus edulis / 100 | GU570521 | |||
Pectinoida | Anomia ephippium | Anomia sp. / 70 | GQ166573 | |||
Cephalopoda | Myopsida | Alloteuthis media | Alloteuthis media / 99 | EU668087 | ||
Loligo forbesi | Loligo forbesi / 100 | AF075402 | ||||
Loligo vulgaris | Loligo vulgaris / 99 | AF075397 | ||||
Sepiida | Sepia officinalis | Sepia officinalis / 99 | EF416306 | |||
Octopoda | Argonauta argo | Argonauta nodosa / 99 | AY557517 | |||
Gastropoda | Osilinus sauciatus | Osilinus sauciatus / 100 | JN686313 | |||
Littorinimorpha | Vermetus triquetrus | Peasiella mauritiana / 80 | HE590850 | |||
Neogastropoda | Nassarius reticulatus | Nassarius reticulatus / 99 | EU827201 | |||
Ocenebra erinaceus | Ocenebra erinaceus / 100 | AY995773 | ||||
Nudibranchia | Armina maculata | Dermatobranchus sp. / 85 | HM162698 | |||
Pleurobranchomorpha | Berthella plumula | Bathyberthella antartica / 84 | AY345027 | |||
Polyplacophora | Chitonida | Acanthochitona crinita | Acanthochitona crinita / 86 | AF120627 | ||
Chaetopleura angulata | Chaetopleura angulata / 100 | AY377703 | ||||
Lepidopleurida | Leptochiton algesirensis | Leptochiton algesirensis / 93 | HQ907849 | |||
Nemertea | Enopla | Monostilifera | Amphiporus sp. | Amphiporus sp. / 89 | EU255601 | |
Platyhelminthes | Rhabditophora | Polycladida | Leptoplana tremellaris | Pseudostylochus intermedius / 82* | BAB39492 | |
Chromista | Ochrophyta | Phaeophyceae | Fucales | Fucus spiralis | Fucus vesiculosus var. spiralis / 100 | EU646757 |