ISSR and AFLP analysis of the temporal and spatial population structure of the post-fire annual, Nicotiana attenuata, in SW Utah

Bahulikar, Rahul A; Stanculescu, Dominic; Preston, Catherine A; Baldwin, Ian T

doi:10.1186/1472-6785-4-12

Table 3 Heterozygosity estimated using Bayesian approach within N. attenuata populations from different AFLP / ISSR primer combinations, total AFLP/ISSR heterozygosity and θ_B estimates.

From: ISSR and AFLP analysis of the temporal and spatial population structure of the post-fire annual, Nicotiana attenuata, in SW Utah

	Pahcoon	Rt 91	Motoqua	Lytle Ranch Preserve	Cedar Pockets	Jackson Spring	Shivwits Reserve	DI Ranch	Goldstrike Washes	Total	Fst (θ_B)
AFLP
E-AGC/M-CAG	0.1906 ± 0.0053	0.1975 ± 0.0079	0.2010 ± 0.0084	0.2135 ± 0.0091	0.2096 ± 0.0094	0.2233 ± 0.0090	0.1978 ± 0.0075	0.2055 ± 0.0103	0.2026 ± 0.0095	0.2152 ± 0.0044	0.0545 ± 0.0097
E-AAC/M-CCG	0.2224 ± 0.0059	0.2371 ± 0.0087	0.2334 ± 0.0094	0.2206 ± 0.0103	0.2363 ± 0.0103	0.2415 ± 0.0102	0.2176 ± 0.0087	0.2405 ± 0.0116	0.2269 ± 0.0109	0.2438 ± 0.0048	0.0598 ± 0.0095
E-ACC/M-CCT	0.2335 ± 0.0049	0.2370 ± 0.0071	0.2490 ± 0.0074	0.2531 ± 0.0083	0.2558 ± 0.0082	0.2453 ± 0.0082	0.2481 ± 0.0064	0.2530 ± 0.0092	0.2537 ± 0.0085	0.2606 ± 0.0041	0.0556 ± 0.0077
Total	0.2185 ± 0.0030	0.2260 ± 0.0044	0.2311 ± 0.0047	0.2332 ± 0.0052	0.2376 ± 0.0053	0.2387 ± 0.0053	0.2254 ± 0.0043	0.2357 ± 0.0058	0.2319 ± 0.0054	0.2432 ± 0.0024	0.0549 ± 0.0050
ISSR
(AG)₈GT	0.1969 ± 0.0139	0.1552 ± 0.0276	0.1644 ± 0.0277	0.1391 ± 0.0265	0.2211 ± 0.0237	0.2301 ± 0.0309	0.2384 ± 0.0156	0.1841 ± 0.0354	0.1252 ± 0.0301	0.2546 ± 0.0098	0.3250 ± 0.0591
(GA)₈AT	0.1890 ± 0.0230	0.2007 ± 0.0285	0.1650 ± 0.0368	0.1554 ± 0.0372	0.1822 ± 0.0323	0.1597 ± 0.0389	0.2556 ± 0.0226	0.1669 ± 0.0421	0.1688 ± 0.0332	0.2517 ± 0.0179	0.3064 ± 0.0553
(CT)₈A	0.3017 ± 0.0302	0.2816 ± 0.0345	0.3414 ± 0.0254	0.3659 ± 0.0258	0.3246 ± 0.0311	0.2701 ± 0.0346	0.2786 ± 0.0196	0.2850 ± 0.0393	0.2348 ± 0.0438	0.3600 ± 0.0167	0.1931 ± 0.0380
(CT)₈G	0.2086 ± 0.0099	0.2172 ± 0.0139	0.2219 ± 0.0159	0.2135 ± 0.0160	0.2122 ± 0.0167	0.2220 ± 0.0157	0.2121 ± 0.0138	0.2235 ± 0.0181	0.2266 ± 0.0160	0.2284 ± 0.0099	0.0508 ± 0.0128
(CA)₈G	0.2086 ± 0.0099	0.2172 ± 0.0139	0.2219 ± 0.0159	0.2135 ± 0.0160	0.2122 ± 0.0167	0.2220 ± 0.0157	0.2121 ± 0.0138	0.2235 ± 0.0181	0.2266 ± 0.0160	0.2284 ± 0.0099	0.1059 ± 0.0341
Total	0.2309 ± 0.0088	0.2190 ± 0.0100	0.2185 ± 0.0104	0.2145 ± 0.0109	0.2166 ± 0.0111	0.2188 ± 0.0118	0.2145 ± 0.0088	0.2190 ± 0.0131	0.2024 ± 0.0124	0.2452 ± 0.0056	0.1180 ± 0.0132
AFLP + ISSR
Total	0.2043 ± 0.0027	0.1885 ± 0.0040	0.1916 ± 0.0044	0.1881 ± 0.0052	0.2001 ± 0.0053	0.2007 ± 0.0052	0.1919 ± 0.0036	0.1884 ± 0.0069	0.1844 ± 0.0056	0.2771 ± 0.0018	0.3305 ± 0.0088

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ISSN: 1472-6785

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