Genomic position | 423 | 1985 | 4144 | 5492 | 5768 | 6515 | 8131 | 8524 | 9166 | 11705 | 11840 | 12799 | 13722 | 15349 | 15534 | 15569 | 15576 | 15647 | 15989 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Locus | 12s rRNA | 16s rRNA | ND2 | COX1 | COX1 | COX1 | ATP6 | ATP6 | COX3 | tRNA LeuCUN | ND5 | ND5 | ND6 | tRNA Thr | D-loop | D-loop | D-loop | D-loop | D-loop |
Locus position | 354 | 891 | 238 | 156 | 432 | 1179 | 195 | 588 | 550 | 21 | 95 | 1054 | 371 | 44 | 96 | 131 | 138 | 208 | 550 |
Nucleotide | A/G | A/G | C/T | A/G | C/T | C/T | A/G | C/T | A/G | A/G | A/G | A/G | A/G | C/T | C/T | A/G | A/G | A/G | C/T |
Amino Acid | - | - | Leu > Leu | Gln > Gln | Asp > Asp | Phe > Phe | Gly > Gly | Leu > Leu | Ala > Thr | - | Asn > Ser | Ser > Gly | Ala > Val | - | - | - | - | - | - |
Changes | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 |
Consistency index | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0.5 | 1 | 1 | 1 | 1 | 0.5 | 1 | 0.5 | 1 | 1 | 1 |
Homoplasy index | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.5 | 0 | 0 | 0 | 0 | 0.5 | 0 | 0.5 | 0 | 0 | 0 |
Retention index | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0.6667 | 1 | 1 | 1 | 1 | 0.833 | 1 | 0 | 1 | 1 | 1 |
Rescaled ci | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0.3333 | 1 | 1 | 1 | 1 | 0.417 | 1 | 0 | 1 | 1 | 1 |